Cheapest return flights from Athens to Heraklion in September from $70

Best time to book flights for Athens (ATH) to Heraklion (HER) flights at AirHint

AirHint found the following cheapest return flights from Athens (ATH) to Heraklion (HER) in September 2025 (see full year).

Return flights

21 Sep - 23 Sep Aegean Airlines direct
27 Sep - 02 Oct Aegean Airlines direct
24 Sep - 27 Sep Aegean Airlines direct
28 Sep - 30 Sep Aegean Airlines direct
13 Sep - 16 Sep Aegean Airlines direct
08 Sep - 16 Sep Aegean Airlines direct
13 Sep - 20 Sep Aegean Airlines direct
26 Sep - 27 Sep Aegean Airlines direct
13 Sep - 15 Sep Aegean Airlines direct
21 Sep - 25 Sep Aegean Airlines direct
16 Sep - 22 Sep Aegean Airlines direct
30 Sep - 01 Oct Aegean Airlines direct
27 Sep - 01 Oct Aegean Airlines direct
30 Sep - 03 Oct Aegean Airlines direct
25 Sep - 02 Oct Aegean Airlines direct
12 Sep - 11 Oct Aegean Airlines direct
16 Sep - 01 Oct SKY express direct
16 Sep - 04 Oct SKY express direct
24 Sep - 04 Oct SKY express direct
25 Sep - 01 Oct SKY express direct

Also check the deals for one-way flights from Athens to Heraklion in September.

Skyscanner

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

Book a cheap hotel in Heraklion

Cheap car rent in Heraklion