AirHint found the following cheapest return flights from Cologne (CGN) to Malta (MLA) in September 2025 (see full year).

Return flights

17 Sep - 26 Sep	Ryanair	direct
17 Sep - 24 Sep	Ryanair	direct
24 Sep - 01 Oct	Eurowings
29 Sep - 01 Oct	Eurowings
26 Sep - 01 Oct	Ryanair
23 Sep - 26 Sep	Ryanair
29 Sep - 10 Oct	Eurowings
24 Sep - 26 Sep	Eurowings
17 Sep - 23 Sep	Ryanair
24 Sep - 26 Sep	Ryanair	direct
30 Sep - 09 Oct	Ryanair
29 Sep - 09 Oct	Ryanair
26 Sep - 30 Sep	Ryanair
26 Sep - 01 Oct	Ryanair	direct
30 Sep - 07 Oct	Ryanair
17 Sep - 25 Sep	Ryanair
24 Sep - 30 Sep	Eurowings
27 Sep - 01 Oct	Ryanair
24 Sep - 01 Oct	Ryanair	direct
17 Sep - 22 Sep	Ryanair	direct

Also check the deals for one-way flights from Cologne to Malta in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Cologne to Malta in September from $146

Return flights