AirHint found the following cheapest return flights from Entebbe (EBB) to Johannesburg (JNB) in September 2025 (see full year).

Return flights

20 Sep - 27 Sep	Ethiopian Airlines
18 Sep - 25 Sep	Ethiopian Airlines
19 Sep - 26 Sep	Ethiopian Airlines
21 Sep - 16 Oct	Ethiopian Airlines
30 Sep - 07 Oct	Ethiopian Airlines
27 Sep - 04 Oct	Kenya Airways
21 Sep - 05 Oct	Kenya Airways
20 Sep - 05 Oct	Kenya Airways
27 Sep - 04 Oct	Uganda Airlines	direct
18 Sep - 19 Sep	Ethiopian Airlines

Also check the deals for one-way flights from Entebbe to Johannesburg in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Entebbe to Johannesburg in September from $333

Return flights