AirHint found the following cheapest return flights from Istanbul (IST) to Malta (MLA) in September 2025 (see full year).

Return flights

28 Sep - 30 Sep	AJet
22 Sep - 25 Sep	Pegasus Airlines
27 Sep - 30 Sep	AJet
26 Sep - 02 Oct	AJet
23 Sep - 27 Sep	Pegasus Airlines
26 Sep - 28 Sep	Wizz Air
03 Sep - 05 Sep	Pegasus Airlines
10 Sep - 14 Oct	Pegasus Airlines
25 Sep - 26 Sep	Wizz Air
26 Sep - 30 Sep	AJet
09 Sep - 25 Sep	KM Malta Airlines	direct
29 Sep - 20 Oct	SKY express
04 Sep - 18 Sep	KM Malta Airlines
29 Sep - 02 Oct	KM Malta Airlines
29 Sep - 04 Oct	AJet
27 Sep - 26 Oct	AJet
30 Sep - 20 Oct	KM Malta Airlines	direct
30 Sep - 07 Oct	KM Malta Airlines	direct
25 Sep - 07 Oct	KM Malta Airlines	direct
29 Sep - 05 Oct	AJet

Also check the deals for one-way flights from Istanbul to Malta in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

Book a cheap hotel in Malta

Cheap car rent in Malta

Cheapest return flights from Istanbul to Malta in September from $171

Return flights