AirHint found the following cheapest return flights from Malta (MLA) to Vilnius (VNO) in September 2025 (see full year).

Return flights

10 Sep - 17 Sep	Ryanair	direct
13 Sep - 15 Sep	Ryanair	direct
08 Sep - 15 Sep	Ryanair	direct
13 Sep - 17 Sep	Ryanair	direct
10 Sep - 13 Sep	Ryanair	direct
08 Sep - 10 Sep	Ryanair
11 Sep - 15 Sep	Ryanair
12 Sep - 15 Sep	Ryanair
08 Sep - 10 Sep	Ryanair	direct
12 Sep - 16 Sep	KM Malta Airlines

Also check the deals for one-way flights from Malta to Vilnius in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Malta to Vilnius in September from $127

Return flights