AirHint found the following cheapest return flights from Tokyo (NRT) to Malta (MLA) in September 2025 (see full year).

Return flights

29 Sep - 19 Oct	Vietnam Airlines
09 Sep - 14 Sep	Jetstar Japan
25 Sep - 29 Sep	Turkish Airlines
17 Sep - 24 Sep	Qatar Airways
30 Sep - 03 Oct	Qatar Airways
16 Sep - 18 Sep	Turkish Airlines
05 Sep - 12 Sep	Qatar Airways
10 Sep - 16 Sep	Emirates
09 Sep - 16 Sep	Emirates
06 Sep - 27 Sep	SWISS
02 Sep - 07 Sep	LOT
05 Sep - 07 Sep	LOT
14 Sep - 04 Oct	SWISS
30 Sep - 06 Oct	Emirates
13 Sep - 12 Oct	SWISS

Also check the deals for one-way flights from Tokyo to Malta in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Tokyo to Malta in September from $976

Return flights