AirHint found the following cheapest return flights from Prague (PRG) to Tokyo (NRT) in September 2025 (see full year).

Return flights

15 Sep - 22 Sep	Ryanair
01 Sep - 30 Sep	Ryanair
10 Sep - 19 Sep	Ryanair
03 Sep - 18 Sep	Ryanair
06 Sep - 13 Sep	Wizz Air Malta
19 Sep - 02 Oct	Hainan Airlines
15 Sep - 21 Sep	Lufthansa
12 Sep - 19 Sep	Hainan Airlines
10 Sep - 22 Sep	Lufthansa
10 Sep - 23 Sep	Finnair
28 Sep - 18 Oct	Eurowings
20 Sep - 09 Oct	Lufthansa
29 Sep - 16 Oct	Qanot Sharq
15 Sep - 25 Sep	Lufthansa
17 Sep - 08 Oct	Lufthansa
26 Sep - 11 Oct	Lufthansa
26 Sep - 10 Oct	Qatar Airways
29 Sep - 06 Oct	Lufthansa
27 Sep - 03 Oct	Qatar Airways
23 Sep - 10 Oct	Lufthansa

Also check the deals for one-way flights from Prague to Tokyo in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Prague to Tokyo in September from $877

Return flights