AirHint found the following cheapest return flights from Zagreb (ZAG) to Tokyo (HND) in September 2025 (see full year).

Return flights

11 Sep - 27 Sep	Ryanair
09 Sep - 18 Sep	Ryanair
12 Sep - 17 Sep	Ryanair
11 Sep - 15 Sep	Ryanair
11 Sep - 17 Sep	Croatia Airlines
04 Sep - 11 Sep	Ryanair
15 Sep - 28 Sep	Croatia Airlines
05 Sep - 09 Sep	Croatia Airlines
08 Sep - 25 Sep	Air France
03 Sep - 17 Sep	Air France
19 Sep - 05 Oct	Croatia Airlines
26 Sep - 07 Oct	Croatia Airlines
20 Sep - 04 Oct	Air France
18 Sep - 04 Oct	Air France
30 Sep - 12 Oct	Air France
19 Sep - 04 Oct	Air France
26 Sep - 08 Oct	Air France
26 Sep - 12 Oct	Air France

Also check the deals for one-way flights from Zagreb to Tokyo in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Zagreb to Tokyo in September from $931

Return flights