AirHint found the following cheapest return flights from Zagreb (ZAG) to Tokyo (NRT) in September 2025 (see full year).

Return flights

16 Sep - 23 Sep	Ryanair
18 Sep - 04 Oct	Ryanair
17 Sep - 24 Sep	Ryanair
15 Sep - 30 Sep	Ryanair
25 Sep - 20 Oct	Ryanair
15 Sep - 29 Sep	Ryanair
09 Sep - 16 Sep	Ryanair
15 Sep - 22 Sep	Ryanair
10 Sep - 19 Sep	Ryanair
15 Sep - 21 Sep	Ryanair
11 Sep - 18 Sep	Ryanair
14 Sep - 22 Sep	Ryanair
25 Sep - 13 Oct	Ryanair
25 Sep - 11 Oct	Ryanair
29 Sep - 09 Oct	LOT
25 Sep - 05 Oct	LOT
22 Sep - 07 Oct	Ryanair
22 Sep - 06 Oct	Ryanair
25 Sep - 03 Oct	Ryanair
23 Sep - 02 Oct	Ryanair

Also check the deals for one-way flights from Zagreb to Tokyo in September.

The deals are updated regularly. The prices may go up as tickets are purchased by other travellers. Only the cheapest flights are offered. Select a price to book and secure these cheap prices.

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Cheapest return flights from Zagreb to Tokyo in September from $927

Return flights